BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F09LP1|AL426249
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1219 1524 0.0
>3x_Contig1219
Length = 5018
Score = 1524 bits (769), Expect = 0.0
Identities = 769/769 (100%)
Strand = Plus / Minus
Query: 1 gatctgtgatttggctgaaaagtacggcgctttgactttcttagatgaagttcacgctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2592 gatctgtgatttggctgaaaagtacggcgctttgactttcttagatgaagttcacgctgt 2533
Query: 61 tggtttgtatggtccacatggtgcaggtgtcgctgaacattgcaactttgatgctcaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2532 tggtttgtatggtccacatggtgcaggtgtcgctgaacattgcaactttgatgctcaccg 2473
Query: 121 caaggctggtattgcttctcctgaattccgcaccgttatggatcgtgttgatatgatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2472 caaggctggtattgcttctcctgaattccgcaccgttatggatcgtgttgatatgatcac 2413
Query: 181 tggtaccttgggtaaatctttcggtactgttggtggttacgttgctggttctttgcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2412 tggtaccttgggtaaatctttcggtactgttggtggttacgttgctggttctttgcagct 2353
Query: 241 aattgactgggtgagatcttatgctcctggtttcatcttcaccactactttaccacctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2352 aattgactgggtgagatcttatgctcctggtttcatcttcaccactactttaccacctgc 2293
Query: 301 tgtcatggcaggtgctgctgaggctatcagataccaacgttctcatttggacttgagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 tgtcatggcaggtgctgctgaggctatcagataccaacgttctcatttggacttgagaca 2233
Query: 361 agaccaacaaagacatacaacctatgttaaagacggtttagctgatttgggtattccagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2232 agaccaacaaagacatacaacctatgttaaagacggtttagctgatttgggtattccagt 2173
Query: 421 gatgccaaacccatctcatattgttccagttttggttggtaaccctcacttggccaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2172 gatgccaaacccatctcatattgttccagttttggttggtaaccctcacttggccaaaca 2113
Query: 481 agcatctgatatcttgatggacaagcatcgtatttacgtccaagccatcaacttcccaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 agcatctgatatcttgatggacaagcatcgtatttacgtccaagccatcaacttcccaac 2053
Query: 541 tgtcgctagaggtaccgaaaggttgagaattaccccaactccgggccacactaacgatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2052 tgtcgctagaggtaccgaaaggttgagaattaccccaactccgggccacactaacgatct 1993
Query: 601 atctgacatcttaatggatgctttggaagatgtctggtccactctacaattaccaagggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 atctgacatcttaatggatgctttggaagatgtctggtccactctacaattaccaagggt 1933
Query: 661 acgtgactgggaagcccaaggcggtttgttgggtgttggtgatccaaaccacgttcccca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1932 acgtgactgggaagcccaaggcggtttgttgggtgttggtgatccaaaccacgttcccca 1873
Query: 721 accaaacttatggacgaaggatcaactgactttgaccaataatgatttg 769
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 accaaacttatggacgaaggatcaactgactttgaccaataatgatttg 1824
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4603
Number of Sequences: 1807
Number of extensions: 4603
Number of successful extensions: 19
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)